QSAR and Docking Studies of Indene N-Oxide Derivatives as PPARγ Agonists
Abstract
Indene N-oxide derivatives were used for docking and three dimensional quantitative structure activity relationship studies. Molecular docking and validation studies were carried out for all compounds on peroxisome proliferator activated receptor γ active site. The reliability of the docking results was acceptable with good root mean square deviation value (ranging from 0.96 to 2Å). The three dimensional quantitative structure activity relationship studies were also carried out by advanced technique (Stepwise forward-backward variable selection method) using training set of 19 compounds and test set of 7 compounds. A statistically reliable model with good predictive power (q2 = 0.8820, Pred r2= 0.7063) was achieved. Both above approaches illustrated insights into the structure activity relationship of these compounds which may helps in the design and development of potent indene N-oxide derivatives as PPARγ agonists.
DOI
https://doi.org/10.22270/jddt.v7i7.1613References
Seidell JC, Br. J. Nutr, Obesity, insulin resistance and diabetes, a worldwide epidemic, 2000, 1, S5-S8.
Desvergne B, Wahli W, Peroxisome Proliferator-Activated Receptors: Nuclear Control of Metabolism, Endo Rev, 1999, 20, 649-688.
Rathi L, Kashaw SK, Dixit A, Pandey G, Saxena AK, Pharmacophore identification and 3D-QSAR studies in N-(2-benzoyl phenyl)-L-tyrosines as PPARγ agonists, Bioorg Med Chem, 2004, 12, 63-69.
Ahn JH, Shin MS, Jung SH, Kim JA, Kim HM, Kim SH, Kang SK, Kim SS, Synthesis and structure–activity relationship of novel indene N-oxide deriv- atives as potent peroxisome proliferator activated receptor g. (PPARg) agonists, Bioorganic Med. Chem. Lett., 2007, 17, 5239-5244.
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